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Metabolic engineering of lipids for crop resilience and nutritional improvements towards sustainable agriculture
Metabolic engineering of lipids in crops presents a promising strategy to enhance resilience against environmental stresso...
Functional & Integrative Genomics
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In silico analysis of () gene in different cultivars of
Chenopodium quinoa is an emerging halophyte plant that has gained significant attention from researchers in recent years d...
Functional & Integrative Genomics
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Comprehensive analysis of orthologous genes reveals functional dynamics and energy metabolism in the rhizospheric microbiome of
Moringa oleifera, known for its nutritional and therapeutic properties, exhibits a complex relationship with its rhizosphe...
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Can the molecular and transgenic breeding of crops be an alternative and sustainable technology to meet food demand?
The gradual increase in the worldwide population represents various challenges, and one of the most alarming being the foo...
Functional & Integrative Genomics
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Roles of Immunity and Endogenous Retroelements in the Pathogenesis of Rheumatoid Arthritis and Treatment Strategies
Rheumatoid arthritis (RA) is a chronic, inflammatory, autoimmune disease that primarily affects the joints. RA usually res...
Functional & Integrative Genomics
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Autoimmune mechanisms and inflammation in obesity-associated type 2 diabetes, atherosclerosis, and non-alcoholic fatty liver disease
Obesity, characterized by the excessive accumulation of white adipose tissue, is a significant global health burden and a ...
Functional & Integrative Genomics
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EXO1 as a potential biomarker for prognosis, immune infiltration, and immunotherapy in pan-cancer analysis
Human EXO1 is a 5' → 3' exonuclease that plays a critical role in regulating cell cycle checkpoi...
Functional & Integrative Genomics
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Exploring the molecular pathways of miRNAs in testicular cancer: from diagnosis to therapeutic innovations
Cancer diagnostics highlight the critical requirement for sensitive and accurate tools with functional biomarkers for earl...
Functional & Integrative Genomics
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Identification and mechanistic analysis of shared biomarkers and pathogenesis in acute pancreatitis and sepsis based on differential gene expression and protein interaction networks
Acute pancreatitis (AP) is a common gastrointestinal inflammatory disease that requires hospitalization, with 40–70%...
Functional & Integrative Genomics
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Identification of a NEK7-related pyroptosis gene signature against pancreatic cancer and evaluation of its potential in tumor microenvironment remodeling via regulating inflammasome complex
The treatment options for pancreatic ductal adenocarcinoma (PDAC) remain limited. It is therefore important to explore new...
Functional & Integrative Genomics
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Multi-omics integration reveals YWHAE as a key mediator of ferroptosis in ARDS
Acute respiratory distress syndrome (ARDS) is a life-threatening condition characterized by severe hypoxemia and high mort...
Functional & Integrative Genomics
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SNP’s use as a potential chemotoxicity stratification tool in breast cancer: from bench to clinic
Breast cancer (BC) remains one of the most prevalent malignancies affecting women worldwide, necessitating ongoing researc...
Functional & Integrative Genomics
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RNA-binding protein HuR interacts with UFM1 mRNA to ameliorate chondrocyte inflammation, apoptosis and extracellular matrix degradation
To investigate the mechanisms by which the RNA-binding protein HuR /ELAVL1 interacts with UFM1 mRNA to ameliorate chondroc...
Functional & Integrative Genomics
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Mitochondrial genome evolution in the orchid subfamily Cypripedioideae (Orchidaceae)
In this study, the mitogenomes of nine species in the subfamily Cypripedioideae were newly sequenced and assembled using b...
Functional & Integrative Genomics
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Integration of metabolite and transcriptome profiles of cultivated and wild rice to unveil gene regulatory networks and key genes determining rice source and sink strength
Targeting source and sink strength for crop yield increase requires a comprehensive genetic and metabolic understanding of...
Functional & Integrative Genomics
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Identification of flowering genes in Camellia perpetua by comparative transcriptome analysis
Camellia perpetua has the excellent characteristic of flowering multiple times throughout the year, which is of great impo...
Functional & Integrative Genomics
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Knockdown of ADAMDEC1 ameliorates ox-LDL-induced endothelial cell injury and atherosclerosis progression
This study was designed to investigate the role of a disintegrin and metalloproteinase domain-like protein decysin 1 (ADAM...
Functional & Integrative Genomics
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Hypoxia-induced circRTN4IP1 promotes progression and glycolysis of hepatocellular carcinoma cells
Hypoxia is one of the hallmarks of solid tumors, especially in hepatocellular carcinoma (HCC). CircRNAs are reported to be...
Functional & Integrative Genomics
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IGF2 is upregulated by its antisense RNA to potentiate pancreatic cancer progression
Pancreatic cancer is a deadly cancer. More and more long noncoding RNAs (lncRNAs) have received confirmation to be dysregu...
Functional & Integrative Genomics
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Benchmarking of bioinformatics tools for NGS-based microRNA profiling with RT-qPCR method
MicroRNAs are vital gene expression regulators, extensively studied worldwide. The large-scale characterization of miRNAom...
Functional & Integrative Genomics
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CFAP61 knockdown aggravates male infertility by inhibiting testosterone secretion by Leydig cells via the MAPK/COX-2 pathway
This study aimed to elucidate the roles of cilia- and flagella-associated protein 61 (CFAP61) in male infertility and its ...
Functional & Integrative Genomics
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3′-tRF-CysGCA overexpression in HEK-293 cells alters the global expression profile and modulates cellular processes and pathways
tRNA fragments (tRFs) are small non-coding RNAs generated through specific cleavage of tRNAs and involved in various biolo...
Functional & Integrative Genomics
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NLRP3/miR-223-3p axis attenuates neuroinflammation induced by chronic intermittent hypoxia
Obstructive sleep apnea (OSA) is mainly characterized by chronic intermittent hypoxia (CIH) with multiple brain injuries. ...
Functional & Integrative Genomics
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The cellular trajectories of tumor-associated macrophages decipher the heterogeneity of pancreatic cancer
Emerging evidence indicates that the interactions and dynamic changes among tumor-associated macrophages (TAMs) are pivota...
Functional & Integrative Genomics
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Comparative transcriptome analysis reveals candidate genes related to the sex differentiation of Schisandra chinensis
Schisandra chinensis is a monoecious plant with unisex flowers. The fruit of S. chinensis is of high medical with economic...
Functional & Integrative Genomics
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Combining single-cell RNA sequencing data and transcriptomic data to unravel potential mechanisms and signature genes of the progression of idiopathic pulmonary fibrosis to lung adenocarcinoma and predict therapeutic agents
Patients with idiopathic pulmonary fibrosis (IPF) have a significantly higher prevalence of lung adenocarcinoma (LUAD) tha...
Functional & Integrative Genomics
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Nrf2 attenuates oxidative stress to mediate the protective effect of ciprofol against cerebral ischemia–reperfusion injury
Neuroinflammation and oxidative stress damage are involved in the pathogenesis of cerebral ischemia–reperfusion inju...
Functional & Integrative Genomics
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Validating post-enrichment steps in environmental RNA analysis for improving its availability from water samples
Environmental RNA (eRNA) analysis is expected to inclusively provide the physiological information of a population and com...
Functional & Integrative Genomics
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Meta-analysis of transcriptomics studies identifies novel attributes and set of genes involved in iron homeostasis in rice
Iron (Fe) is an important micronutrient for humans as well as for plant growth and development. Rice employs multiple mech...
Functional & Integrative Genomics
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Long noncoding RNA LINC00482 silencing sensitizes non-small cell lung cancer cells to cisplatin by downregulating CLASRP via E2F1
Long noncoding RNA LINC00482 (LINC00482) is dysregulated in non-small cell lung cancer cells (NSCLC). Herein, this researc...
Functional & Integrative Genomics
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