Nakano, H., Age, reproduction and migration of blue shark in the north Pacific Ocean, Bull. Natl. Res. Inst. Far Seas Fish., 1994, vol. 31, pp. 141–256.

Google Scholar 

Cardeñosa, D., Shea, K.H., Zhang, H., et al., Small fins, large trade: a snapshot of the species composition of low-value shark fins in the Hong Kong markets, Anim. Conserv., 2020, vol. 23, no. 2, pp. 203–211. https://doi.org/10.1111/acv.12529

Article  Google Scholar 

Frédou, L.F., Tolotti, T.M., Frédou, T., et al., Sharks caught by the Brazilian tuna longline fleet: an overview, Rev. Fish Biol. Fish., 2015, vol. 25, pp. 365–377. https://doi.org/10.1007/s11160-014-9380-8

Article  Google Scholar 

Kohler, N.E., Turner, P.A., Hoey, J.J., et al., Tag and recapture data for three pelagic shark species: blue shark (Prionace glauca), shortfin mako (Isurus oxyrinchus), and porbeagle (Lamna nasus) in the North Atlantic Ocean, Int. Comm. Conserv. Atl. Tunas, 2002, vol. 54, pp. 1231–1260.

Google Scholar 

Stevens, J.D., Bradford, R.W., and West, G.J., Satellite tagging of blue sharks (Prionace glauca) and other pelagic sharks off eastern Australia: depth behaviour, temperature experience and movements, Mar. Biol., 2010, vol. 157, pp. 575–591. https://doi.org/10.1007/s00227-009-1343-6

Article  Google Scholar 

Chen, B., Long, J., Liu, J., Wang, P., Ma, Z., Lan, Z., Liang, Z., Fu, Q., Zhang, Z., Zhang, Y., Duan, Y., Zhu, P., and Liao, Y., The development of novel genome-SSRs, multiplex PCR panels, and allelic ladders for parentage identification in Tachypleus tridentatus, Aquaculture., 2024, vol. 592, p. 741262. https://doi.org/10.1016/j.aquaculture.2024.741262

Article  CAS  Google Scholar 

Yang, W.Y., Zheng, J.J., Jia, B.Y., et al., Microsatellite molecular markers and their research progress in animal genetics and breeding, Genomics Appl. Biol., 2017, vol. 36, pp. 4644–4649.

Google Scholar 

Chambers, G.K. and MacAvoy, E.S., Microsatellites: consensus and controversy, Comp. Biochem. Physiol., Part B: Biochem. Mol. Biol., 2000, vol. 126, no. 4, pp. 455–476. https://doi.org/10.1016/S0305-0491(00)00233-9

Article  CAS  Google Scholar 

Zhao, R., Cai, S., Lu, D., et al., Genomic comparison and genetic marker identification of the white-spotted bamboo shark Chiloscyllium plagiosum, Front. Mar. Sci., 2022, vol. 9, p. 936681. https://doi.org/10.3389/fmars.2022.936681

Article  Google Scholar 

Ma, Q., Wu, Y.W., Wang, L.Y., et al., Genome-wide microsatellite characterization and screening of polymorphic markers in Cichlid macrocephalus, Prog. Fish. Sci., 2023, vol. 44, pp. 135–144.

CAS  Google Scholar 

Liu, B.H., Shi, Y.J., Yuan, J.Y., et al., Estimation of genomic characteristics by analyzing k-mer frequency in de novo genome projects, Quant. Biol., 2013, vol. 35, pp. 62–67. https://doi.org/10.48550/arXiv.1308.2012

Article  Google Scholar 

Luo, R., Liu, B., Xie, Y., Li, Z., Huang, W., Yuan, J., He, G., Chen, Y., Pan, Q., Liu, Y., Tang, J., Wu, G., Zhang, H., Shi, Y., Liu, Y., et al., SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler, Giga Sci., 2012, vol. 1, no. 1, p. 1. https://doi.org/10.1186/2047-217X-1-18

Article  Google Scholar 

Song, N., Ma, S., Zhao, X., et al., Genomic characteristics of Okamejei kenojei and the implications to its evolutionary biology study, Mar. Biotechnol., 2023, vol. 25, no. 5, pp. 815–823. https://doi.org/10.1007/s10126-023-10242-3

Article  CAS  Google Scholar 

Venkatesh, B., Kirkness, E.F., Loh, Y.H., et al., Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome, PLoS Biol., 2007, vol. 5, no. 4, p. e101. https://doi.org/10.1371/journal.pbio.0050101

Article  PubMed  PubMed Central  CAS  Google Scholar 

Zhang, Y., Gao, H., Li, H., et al., The white-spotted bamboo shark genome reveals chromosome rearrangements and fast-evolving immune genes of cartilaginous fish, Science, 2020, vol. 23, no. 11, p. 101754. https://doi.org/10.1016/j.isci.2020.101754

Article  CAS  Google Scholar 

Hara, Y., Yamaguchi, K., Onimaru, K., et al., Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates, Nat. Ecol. Evol., 2018, vol. 2, no. 11, pp. 1761–1771. https://doi.org/10.1038/s41559-018-0673-5

Article  PubMed  Google Scholar 

Read, T.D., Petit, R.A., Joseph, S.J., et al., Draft sequencing and assembly of the genome of the world’s largest fish, the whale shark: Rhincodon typus Smith 1828, BMC Genomics, 2017, vol. 18, no. 1, p. 532. https://doi.org/10.1186/s12864-017-3926-9

Article  PubMed  PubMed Central  CAS  Google Scholar 

Weber, J.A., Park, S.G., Luria, V., et al., The whale shark genome reveals how genomic and physiological properties scale with body size, Proc. Natl. Acad. Sci. U.S.A., 2020, vol. 117, no. 34, pp. 20 662–20 671. https://doi.org/10.1073/pnas.1922576117

Article  CAS  Google Scholar 

Chalopin, D., Naville, M., Plard, F., et al., Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates, Genome B-iol. Evol., 2015, vol. 7, no. 2, pp. 567–580. https://doi.org/10.1093/gbe/evv005

Article  CAS  Google Scholar 

Gao, S.H., Yu, H.Y., Wu, S.Y., et al., Advances in complex genome sequencing technology, Hereditas, 2018, vol. 40, pp. 944–963.

PubMed  Google Scholar 

Wierdl, M., Dominska, M., and Petes, T.D., Microsatellite instability in yeast: dependence on the length of the microsatellite, Genetics, 1997, vol. 146, no. 3, pp. 769–779. https://doi.org/10.1093/genetics/146.3.769

Article  PubMed  PubMed Central  CAS  Google Scholar 

Marie-Pierre, C. and Arnaud, E., Microsatellite null alleles and estimation of population differentiation, Mol. Biol. Evol., 2007, vol. 24, no. 3, pp. 621–631. https://doi.org/10.1093/molbev/msl191

Article  CAS  Google Scholar 

Zhao, R.R. and Xu, S.Y., Genome-wide survey analysis and characterization of microsatellite distributions in Hemitripterus villosus, J. Fish. Sci. China, 2022, vol. 29, pp. 994–1001.

Google Scholar 

Xu, S.Y., Song, N., Xiao, S.J., et al., Whole genome survey analysis and microsatellite motif identification of Sebastiscus marmoratus, Biosci. Rep., 2020, vol. 40, no. 2, p. BSR20192252. https://doi.org/10.1042/BSR20192252

Article  PubMed  PubMed Central  CAS  Google Scholar 

Cui, J.Z., Shen, X.Y., Yang, G.P., et al., Analysis of microsatellite characteristics of Takifugu rubripes, J. Ocean Univ. China, 2006, vol. 36, pp. 249–254, 272.

CAS  Google Scholar 

Luo, W.Y., Hu, J., and Li, X.F., Microsatellite sequences and their applications, Hereditas., 2003, vol. 25, pp. 615–619.

PubMed  CAS  Google Scholar 

Duan, Y.N., Liu, Y., Hu, Y.C., et al., Microsatellite distribution characteristics of the whole genome of Scleropages, China Agric. Bull., 2019, vol. 35, pp. 152–158.

Google Scholar 

Li, Z., Chen, F., Huang, C., et al., Genome-wide mapping and characterization of microsatellites in the swamp eel genome, Sci. Rep., 2017, vol. 7, no. 1, p. 3157. https://doi.org/10.1038/s41598-017-03330-7

Article  PubMed  PubMed Central  CAS  Google Scholar 

Lei, Y., Zhou, Y., Price, M., et al., Genome-wide characterization of microsatellite DNA in fishes: survey and analysis of their abundance and frequency in genome-specific regions, BMC Genomics., 2021, vol. 22, no. 1, p. 421. https://doi.org/10.1186/s12864-021-07752-6

Article  PubMed  PubMed Central  CAS  Google Scholar 

Zardoya, R., Vollmer, D.M., Craddock, C., et al., Evolutionary conservation of microsatellite flanking regions and their use in resolving the phylogeny of cichlid fishes (Pisces: Perciformes), Proc. R. Soc., B, 1996, vol. 263, no. 1376, pp. 1589–1598. https://doi.org/10.1098/rspb.1996.0233

Article  PubMed  CAS  Google Scholar 

Kuraku, S., Shark and ray genomics for disentangling their morphological diversity and vertebrate evolution, Dev. Biol., 2021, vol. 477, pp. 262–272. https://doi.org/10.1016/j.ydbio.2021.06.001

Article  PubMed  CAS  Google Scholar 

Wang, Y.R., Yang, W., Ren, X.L., et al., Characterization of microsatellite distribution and development of polymorphic markers in the genome of Scatophagus argus, J. Guangdong Ocean Univ., 2020, vol. 40, pp. 7–14.

CAS  Google Scholar 

Schorderet, D.F. and Gartler, S.M., Analysis of CpG suppression in methylated and nonmethylated species, Proc. Natl. Acad. Sci. U.S.A., 1992, vol. 89, no. 3, pp. 957–961.https://doi.org/10.1073/pnas.89.3.957

Article  PubMed  PubMed Central  CAS  Google Scholar 

Huang, J., Zhou, Y., Liu, Y.Z., et al. Microsatellite characterization of the Sichuan Arborophila genome based on 454 GS FLX high-throughput sequencing, Sichuan J. Zool., 2015, vol. 34, pp. 8–14.

CAS  Google Scholar 

Ellegren, H., Microsatellite evolution: a battle between replication slippage and point mutation, Trends Genet., 2002, vol. 18, no. 2, p. 70. https://doi.org/10.1016/S0168-9525(02)02631-8