Roy, P. H. et al. Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7. PLoS One 5, e8842 (2010).

Article  PubMed  PubMed Central  Google Scholar 

Balasubramanian, D. & Mathee, K. Comparative transcriptome analyses of Pseudomonas aeruginosa. Hum. Genomics 3, 349–361 (2009).

Article  PubMed  PubMed Central  Google Scholar 

Wolfgang, M. C. et al. Conservation of genome content and virulence determinants among clinical and environmental isolates of Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. USA 100, 8484–8489 (2003).

Article  PubMed  PubMed Central  Google Scholar 

Lee, D. G. et al. Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial. Genome Biol. 7, R90-2006-7-10-r90. Epub 2006 Oct 12 (2006).

Article  Google Scholar 

Vasquez-Rifo, A., Veksler-Lublinsky, I., Cheng, Z., Ausubel, F. M. & Ambros, V. The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans. Genome Biol. 20, 270-019–1890-1 (2019).

Google Scholar 

Apidianakis, Y. & Rahme, L. G. Drosophila melanogaster as a model host for studying Pseudomonas aeruginosa infection. Nat. Protoc. 4, 1285–1294 (2009).

Article  PubMed  Google Scholar 

Yeung, A. T. et al. Swarming of Pseudomonas aeruginosa is controlled by a broad spectrum of transcriptional regulators, including MetR. J. Bacteriol. 191, 5592–5602 (2009).

Article  PubMed  PubMed Central  Google Scholar 

Tokumoto, U. & Takahashi, Y. Genetic analysis of the isc operon in Escherichia coli involved in the biogenesis of cellular iron–sulfur proteins. J. Biochem. 130, 63–71 (2001).

Article  PubMed  Google Scholar 

Linster, C. L., Van Schaftingen, E. & Hanson, A. D. Metabolite damage and its repair or pre-emption. Nat. Chem. Biol. 9, 72–80 (2013).

Article  PubMed  Google Scholar 

Kremer, L. S. et al. NAXE mutations disrupt the cellular NAD(P)HX repair system and cause a lethal neurometabolic disorder of early childhood. Am. J. Hum. Genet. 99, 894–902 (2016).

Article  PubMed  PubMed Central  Google Scholar 

Mills, P. B. et al. Mutations in antiquitin in individuals with pyridoxine-dependent seizures. Nat. Med. 12, 307–309 (2006).

Article  PubMed  Google Scholar 

Shah P, Nanduri B, Swiatlo E, Ma Y, Pendarvis K. Polyamine biosynthesis and transport mechanisms are crucial for fitness and pathogenesis of Streptococcus pneumoniae. Microbiology. 2010;157:504–15.

Article  PubMed  Google Scholar 

Ayoola MB, Nakamya MF, Shack LA, Park S, Lim J, Lee JH, et al. SP_0916 is an arginine decarboxylase that catalyzes the synthesis of agmatine, which is critical for capsule biosynthesis in Streptococcus pneumoniae. Front Microbiol. 2020;11:578533.

Article  PubMed  PubMed Central  Google Scholar 

Bergel A, Féron D, Mollica A (2005) Catalysis of oxygen reduction in PEM fuel cell by seawater biofilm. Electrochem Commun 7:900–904. https://doi.org/10.1016/j.elecom.2005.06.006

Article  Google Scholar 

De SL, Boeckx P, Verstraete W (2010) Evaluation of biocathodes in freshwater and brackish sediment microbial fuel cells. Appl Microbiol Biotechnol 87:1675–1687. https://doi.org/10.1007/s00253-010-2645-9

Article  Google Scholar 

Guerrini E, Grattieri M, Faggianelli A, Cristiani P, Trasatti S (2015) PTFE effect on the electrocatalysis of the oxygen reduction reaction in membraneless microbial fuel cells. Bioelectrochemistry 106:240–247. https://doi.org/10.1016/j.bioelechem.2015.05.008

Article  PubMed  Google Scholar 

Yazdi AZ, Roberts EPL, Sundararaj U (2016) Nitrogen/sulfur co-doped helical graphene nanoribbons for efficient oxygen reduction in alkaline and acidic electrolytes. Carbon 100:99–108. https://doi.org/10.1016/j.carbon.2015.12.096

Article  Google Scholar 

Shao M, Chang Q, Dodelet JP, Chenitz R (2016) Recent advances in electrocatalysts for oxygen reduction reaction. Chem Rev 116:3594–3657. https://doi.org/10.1021/acs.chemrev.5b00462

Article  PubMed  Google Scholar 

Hess C, Enichlmayr H, Jandreski-Cvetkovic D, Liebhart D, Bilic I, Hess M (2013) Riemerella anatipestifer outbreaks in commercial goose flocks and identification of isolates by MALDI-TOF mass spectrometry. Avian Pathol 42:151–156. https://doi.org/10.1080/03079457.2013.775401

Article  PubMed  Google Scholar 

Andrews SC, Robinson AK, Rodriguez-Quinones F (2003) Bacterial iron homeostasis. FEMS Microbiol Rev 27:215–237. https://doi.org/10.1016/S0168-6445(03)00055-X

Article  PubMed  Google Scholar 

Huynh C, Andrews NW (2008) Iron acquisition within host cells and the pathogenicity of Leishmania. Cell Microbiol 10:293–300. https://doi.org/10.1111/j.1462-5822.2007.01095.x

Article  PubMed  Google Scholar 

Nairz M, Schroll A, Sonnweber T, Weiss G (2010) The struggle for iron - a metal at the host-pathogen interface. Cell Microbiol 12:1691–1702. https://doi.org/10.1111/j.1462-5822.2010.01529.x

Article  PubMed  Google Scholar 

Chasteen ND, Harrison PM (1999) Mineralization in ferritin: an efficient means of iron storage. J Struct Biol 126:182–194. https://doi.org/10.1006/jsbi.1999.4118

Article  PubMed  Google Scholar 

Stojiljkovic I, Baumler AJ, Hantke K (1994) Fur regulon in gram-negative bacteria. Identification and characterization of new iron-regulated Escherichia coli genes by a fur titration assay. J Mol Biol 236:531–545. https://doi.org/10.1006/jmbi.1994.1163

Article  PubMed  Google Scholar 

Kurabayashi K, Agata T, Asano H, Tomita H, Hirakawa H (2016) Fur represses adhesion to, invasion of, and intracellular bacterial community formation within bladder epithelial cells and motility in uropathogenic Escherichia coli. Infect Immun 84:3220–3231. https://doi.org/10.1128/IAI.00369-16

Article  PubMed  PubMed Central  Google Scholar 

Hu, Y. H. & Sun, L. The global regulatory effect of Edwardsiella tarda Fur on iron acquisition, stress resistance, and host infection: a proteomics-based interpretation. J. Proteom. 140, 100–110 (2016).

Article  Google Scholar 

Choi J, Ryu S (2019) Regulation of iron uptake by fine-tuning the iron responsiveness of the iron sensor Fur. Appl Environ Microbiol 85:e03026–e3118. https://doi.org/10.1128/AEM.03026-18

Article  PubMed  PubMed Central  Google Scholar 

Santos R, Batista BB, da Silva Neto JF (2020) Ferric uptake regulator Fur coordinates siderophore production and defense against iron toxicity and oxidative stress and contributes to virulence in Chromobacterium violaceum. Appl Environ Microbiol 86:e01620–e1720. https://doi.org/10.1128/AEM.01620-20

Article  PubMed  PubMed Central  Google Scholar 

Liao H, Cheng X, Zhu D, Wang M, Jia R, Chen S, Chen X, Biville F, Liu M, Cheng A (2015) TonB Energy transduction systems of Riemerella anatipestifer are required for iron and hemin utilization. PLoS One 10:e0127506. https://doi.org/10.1371/journal.pone.0127506

Article  PubMed  PubMed Central  Google Scholar 

Liu M, Wang M, Zhu D, Wang M, Jia R, Chen S, Sun K, Yang Q, Wu Y, Chen X, Biville F, Cheng A (2016) Investigation of TbfA in Riemerella anatipestifer using plasmid-based methods for gene over-expression and knockdown. Sci Rep 6:37159. https://doi.org/10.1038/srep37159

Article  PubMed  PubMed Central  Google Scholar 

Wang X, Liu W, Zhu D, Yang L, Liu M, Yin S, Wang M, Jia R, Chen S, Sun K, Cheng A, Chen X (2014) Comparative genomics of Riemerella anatipestifer reveals genetic diversity. BMC Genomics 15:479. https://doi.org/10.1186/1471-2164-15-479

Article  PubMed  PubMed Central  Google Scholar 

Guo Y, Hu D, Guo J, Li X, Guo J, Wang X, Xiao Y, Jin H, Liu M, Li Z, Bi D, Zhou Z (2017) The role of the regulator Fur in gene regulation and virulence of Riemerella anatipestifer assessed using an unmarked gene deletion system. Front Cell Infect Microbiol 7:382. https://doi.org/10.3389/fcimb.2017.00382

Article  PubMed  PubMed Central  Google Scholar 

Crosa LM, Crosa JH, Heffron F (2009) Iron transport in Francisella in the absence of a recognizable TonB protein still requires energy generated by the proton motive force. Biometals 22:337–344. https://doi.org/10.1007/s10534-008-9170-7

Article  PubMed