Neurodegeneration

X-linked dystonia parkinsonism disease

Induced pluripotent stem cells

Medium spiny neurons

Quantitative proteomics

RNA metabolism

RNA splicing

activating transcription factor 2

central nervous system

data-dependent acquisition

data-independent acquisition

early growth response 2

gamma-aminobutyric acid

induced pluripotent stem cells

Kyoto Encyclopedia of Genes and Genomes

liquid chromatography-tandem mass spectrometry

lateral ganglionic eminence

microtubule associated protein 2

mitochondrial ribosomal protein families

principal component analysis

DNA polymerase delta interacting protein 3

spinocerebellar ataxia

SRY-box transcription factor 2

serine and arginine rich splicing factor families

TATA-binding protein associated factor 1

TAF1 aberrant transcript that is composed the canonical exon32 spliced to a cryptic exon in intron 32

transcription factor II D

tubulin beta 3 class III

weighted coexpression network analysis

X-linked dystonia-parkinsonism

extracted ion chromatogram

YY1 transcription factor

Raw data, complete MS data sets, and spectral libraries have been uploaded to the Center for Computational Mass Spectrometry and to the MassIVE repository at UCSD and can be downloaded using the following link: https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=f168b6b041ae47a5bbe6ffb63c100b20 (MassIVE ID number: MSV000092344; ProteomeXchange ID: PXD043562).

[Note to the reviewers: To access the data repository MassIVE (UCSD) for MS data, please use: Username: MSV000092344_reviewer; Password: winter].

© 2023 Published by Elsevier Inc.