Anaka M, Lynn A, Mcginn P, Lloyd V (2009) Genomic imprinting in Drosophila has properties of both mammalian and insect imprinting. Dev Genes Evol 219:59–66. https://doi.org/10.1007/s00427-008-0267-3
Bulut B, Aydinli Z, Türktaş-Erken M (2020) MSAP analysis reveals diverse epigenetic statuses in opium poppy varieties with different benzyisoquinoline alkaloid content. Turk J Biol 44:103–109. https://doi.org/10.3906/biy-1911-69
Article CAS PubMed PubMed Central Google Scholar
Casals F, Cáceres M, Ruiz A (2003) The Foldback-like transposon Galileo is involved in the generation of two different natural chromosomal inversions of Drosophila buzzatii. Mol Biol Evol 20:674–685. https://doi.org/10.1093/molbev/msg070
Article CAS PubMed Google Scholar
Deobagkar D, Deshpande A, Chatterjee S, Kelkar A (2004) CpC methylation is present in Drosophila melanogaster and undergoes changes during its life cycle. Drosoph Inf Serv 87:1–4
Deshmukh S et al (2018) Levels of DNA cytosine methylation in the Drosophila genome. PeerJ, 6, e5119. https://doi.org/10.7717/peerj.5119
Doherty T, Roth T (2016) Insight from animal models of environmentally driven epigenetic changes in the developing and adult brain. Dev Psychopathol 28:1229–1243. https://doi.org/10.1017/S095457941600081X
Article PubMed PubMed Central Google Scholar
Ewing B, Green P (1998) Base-calling of automated sequencer traces using Phred. II. Error probabilities. Genome Res 8:186–194. https://doi.org/10.1101/gr.8.3.186
Article CAS PubMed Google Scholar
Fanara JJ, Fontdevila A, Hasson E (1999) Oviposition preference, viability, developmental time and body size in the cactophilic sibling species Drosophila koepferae and D. buzzatii in association to their natural hosts. Evol Ecol 13:173–190. https://doi.org/10.1111/j.0014-3820.2001.tb00774.x
Fitz-James MH, Cavalli G (2022) Molecular mechanisms of transgenerational epigenetic inheritance. Nat Rev Genet 23:325–341. https://doi.org/10.1038/s41576-021-00438-5
Article CAS PubMed Google Scholar
Fulneček J, Kovařík A (2014) How to interpret methylation sensitive amplified polymorphism (MSAP) profiles? BMC Genet 15:1–9. https://doi.org/10.1186/1471-2156-15-2
Garcia RN, D’Ávila MF, Robe LJ, Loreto ELDS, Panzera Y, Heredia FOD, Valente VLDS (2007) First evidence of methylation in the genome of Drosophila willistoni. Genetica 131:91–105. https://doi.org/10.1007/s10709-006-9116-3
Article CAS PubMed Google Scholar
Glastad K, Gokhale K, Liebig J, Goodisman MAD (2016) The caste- and sex-specific DNA methylome of the termite Zootermopsis nevadensis. Sci Rep 6:37110. https://doi.org/10.1038/srep37110
Article CAS PubMed PubMed Central Google Scholar
Glastad KM, Hunt BG, Goodisman MAD (2019) Epigenetics in insects: genome regulation and the generation of phenotypic diversity. Annu Rev Entomol 64:185–203. https://doi.org/10.1146/annurev-ento-011118-111914
Article CAS PubMed Google Scholar
González-Benito ME, Ibáñez MÁ, Pirredda M, Mira S, Martín C (2020) Application of the MSAP technique to evaluate epigenetic changes in plant conservation. Int J Mol Sci 21:7459. https://doi.org/10.3390/ijms21207459
Article CAS PubMed PubMed Central Google Scholar
Guarino F, Cicatelli A, Brundu G, Improta G, Triassi M, Castiglione S (2019) The use of MSAP reveals epigenetic diversity of the invasive clonal populations of Arundo donax L. PLoS ONE 14:e0215096. https://doi.org/10.1371/journal.pone.0215096
Article CAS PubMed PubMed Central Google Scholar
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
Hara M, Kitamura T, Fukui H, Tabata M (1993) Induction of berberine biosynthesis by cytokinins in Thalictrum minus cell suspension cultures. Plant Cell Rep 12:70–73. https://doi.org/10.1007/BF00241937
Article CAS PubMed Google Scholar
Herrera CM, Bazaga P (2010) Epigenetic differentiation and relationship to adaptive genetic divergence in discrete populations of the violet Viola cazorlensis. New Phytol 187:867–876. https://doi.org/10.1111/j.1469-8137.2010.03298.x
Article CAS PubMed Google Scholar
Hsu PS, Yu SH, Tsai YT, Chang JY, Tsai LK, Ye CH, Song NY, Yau LC, Lin SP (2021) More than causing (epi)genomic instability: emerging physiological implications of transposable element modulation. J Biomed Sci 28:58–72. https://doi.org/10.1186/s12929-021-00754-2
Article CAS PubMed PubMed Central Google Scholar
Hutchins AP, Pei D (2015) Transposable elements at the center of the crossroads between embryogenesis, embryonic stem cells, reprogramming, and long non-coding RNAs. Sci Bull (Beijing) 60:1722–1733. https://doi.org/10.1007/s11434-015-0905-x
Article CAS PubMed Google Scholar
Kamble SM, Debaje P, Ranveer RC, Sahoo AK (2017) Kamble SM, Debaje P, Ranveer RC, Sahoo AK (2017) Nutritional importance of cactus: a review. Trends Biosci. 10(37):7668–7677
Kircher HW, Heed WB, Russel JS, Grove J (1967) Senita cactus alkaloids: their significance to sonorant desert Drosophila ecology. J Insect Physiol 13:1869–1874
Lyko F, Ramsahoye BH, Jaenisch R (2000) DNA methylation in Drosophila melanogaster. Nature 408:538–540. https://doi.org/10.1038/35046205
Article CAS PubMed Google Scholar
Manfrin MH, Sene FM (2006) Cactophilic Drosophila in South America: a model for evolutionary studies. Genetica 126:57–75. https://doi.org/10.1007/s10709-005-1432-5
Marzo M, Puig M, Ruiz A (2008) The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus. Proc Natl Acad Sci USA 105:2957–2962. https://doi.org/10.1073/pnas.0712110105
Article PubMed PubMed Central Google Scholar
Mi S, Chen S, Li W, Fang L, Yu Y (2021) Effects of sperm DNA methylation on domesticated animal performance and perspectives on cross-species epigenetics in animal breeding. Anim Front 11:39–47. https://doi.org/10.1093/af/vfab053
Article PubMed PubMed Central Google Scholar
Moraes EM, Sene FM (2007) Microsatellite and morphometric variation in Drosophila gouveai: the relative importance of historical and current factors in shaping the genetic population structure. J Zool Syst Evol Res 45:336–344. https://doi.org/10.1111/j.1439-0469.2007.00411.x
Morgan HD, Santos F, Green K, Dean W, Reik W (2005) Epigenetic reprogramming in mammals. Hum Mol Genet 14:47–58. https://doi.org/10.1093/hmg/ddi114
Olerup O, Zetterquist H (1992) HLA-DR typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours: an alternative to serological DR typing in clinical practice including donor-recipient matching in cadaveric transplantation. Tissue Antigens 39:225–235. https://doi.org/10.1111/j.1399-0039.1992.tb01940.x
Article CAS PubMed Google Scholar
Oliveira SA, Machado MFPS, Prioli AJ, Mangolin CA (1995) In vitro propagation of Cereus peruvianus Mill. (Cactaceae). Vitro Cell Dev Biol Plant 31:47–50
Panis DND, Padró J, Furió-Tarí P, Tarazona S, Carmona PSM, Soto IM, Dopazo H, Conesa A, Hasson E (2016) Transcriptome modulation during host shift is driven by secondary metabolites in desert Drosophila. Mol Ecol 25:4534–4550. https://doi.org/10.1111/mec.13785
Article CAS PubMed Google Scholar
Peakall R, Smouse PE (2012) GenAlEx 6.5: Genetic analysis in excel. Population Genetic Software for Teaching and Research—An Update. Bioinf Appl Note 28:2537–2539. http://doi.
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